.. pastawrap documentation master file, created by
   sphinx-quickstart on Wed Dec 16 13:54:45 2020.

Welcome to pastaWRAP!
=====================================

   **pastaWRAP** is a Python wrapper for **R-based Awesome Toolkit for PASTA**,
   more commonly known as `ratPASTA <https://github.com/ikodvanj/ratPASTA>`_ - an
   R package used for processing and visualising data from startle experiments in
   rodents or experiments measuring grip strength in rodents. Currently, pastaWRAP only
   supports ratPASTA functionality for startle experiments, with plans for adding
   griPASTA (grip strength test) functionality wrapping at a later date. The input data
   for this package is created with a **PASTA** solution (**Platform for Acoustic STArtle**),
   described in detail here:

   *Virag, D., Homolak, J., Kodvanj, I., Babic Perhoc, A., Knezovic, A.,
   Osmanovic Barilar, J., & Salkovic-Petrisic, M. (2020). Repurposing a
   digital kitchen scale for neuroscience research: a complete hardware and
   software cookbook for PASTA. BioRxiv, 2020.04.10.035766.*
   `<https://doi.org/10.1101/2020.04.10.035766>`_

   Using the same platform for measuring grip strength in rodents is
   described here:

   *Homolak, J., Virag, D., Kodvanj, I., Matak, I., Babic Perhoc, A.,
   Knezovic, A., Osmanovic Barilar, J., Salkovic-Petrisic, M. (2020).
   griPASTA: A hacked kitchen scale for quantification of grip strength in
   rodents. BioRxiv, 2020.07.23.217737.*
   `<https://doi.org/10.1101/2020.07.23.217737>`_

   Full pastaWRAP source code is available `here <https://github.com/davorvr/pastaWRAP>`_
   under the GPLv3 license.

.. toctree::
   :maxdepth: 2
   :caption: Contents:

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Documentation
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.. automodule:: pastawrap
   :members:

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Indices and tables
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* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`